Pepbase-P (Phosphopeptide datasets)

Publication Title Download Peptide List Remarks
Mol. Cell. Proteomics 2007; 6: 1103-1109 Phosphopeptide Enrichment by Aliphatic Hydroxy Acid-Modified Metal Oxide Chromatography for NanoLC-MS/MS in Proteomics Applications [Excel] [Text] * Database searching against SwissProt 54.0 was performed using the dataset reported in the original publication.
Anal. Sci. 2008; 24: 161-166 Automated Phosphoproteome Analysis for Cultured Cancer Cells by Two-Dimensional NanoLC-MS using a Calcined Titania/C18 Biphasic Column [Excel] [Text] -
Mol Syst Biol. 2008; 4: 193 Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis Peptide Search -

Pepbase-M (Membrane proteome datasets)

Publication Title Download Peptide List Remarks
J. Proteome Res. 2008; Epub ahead of print Phase Transfer Surfactant-Aided Trypsin Digestion for Membrane Proteome Analysis [Excel] [Text] -

(C) 2007-2008 Institute for Advanced Biosciences, Keio University